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A. Valente et al.: A compilation of global bio-optical in situ data
Earth Syst. Sei. Data, 8, 235-252, 2016
www.earth-syst-sci-data.net/8/235/2016/
Figure 8. Global distribution of chlorophyll a concentration per in
tervals of the observed value. All chlorophyll data were considered,
but for a given station HPLC data were selected if available.
Figure 9. Global distribution of chlorophyll a concentration per
dataset in the final table. All chlorophyll data were considered, but
for a given station HPLC data were selected if available.
Indian oceans). Of the contributing datasets, NOMAD and
SeaBASS provide a good spatial coverage in many regions
(Fig. 9). The ICES and MERMAID data are mainly located
along the coastal regions of Europe. The AMT data cover the
central part of the Atlantic Ocean. For additional analysis and
as an example of the applications of the compiled dataset, the
combined chlorophyll data (chla_fluor and chla_hplc) were
partitioned into 5° x 5° boxes and for each box the number
of observations, average value and standard deviation were
computed (Fig. 10 a, b and c, respectively). The number of
observations can be very high (> 1000) in some boxes along
the European and North American coastlines and relatively
low (<20) in oceanic regions. Again there is an appearance
in the average value map (Fig. 10b) of well-known biogeo-
graphical features, such has the lower chlorophyll in the sub
tropical gyres and high values in coastal and upwelling areas.
There is a close correspondence between the spatial patterns
of the averaged and standard deviation maps (Fig. 10 b and
c), which may be an indicator of the data quality.
Coincident observations of chlorophyll a concentration
and remote-sensing reflectance are available at 3562 sta
tions. These observations are mostly from NOMAD (85 %),
MERMAID (10%) and SeaBASS (5%). The maximum
of three band ratios of remote-sensing reflectance is
-180" -120" -60" 0° 60° 120° 180"
Figure 10. The chlorophyll a (mgm -3 ) data partitioned into
5° x 5° boxes showing the (a) number of observations, (b) average
value and (c) standard deviation in each box. All chlorophyll data
were considered, but for a given station HPLC data were selected if
available. In the standard deviation plot, grey represents boxes with
zero standard deviation (i.e. one observation).
plotted against chlorophyll a concentration (Fig. 11).
The chla values used are the combined HPLC and flu-
orometric chlorophyll a, and for rrs the closest spectral
observation within 2nm was used. The maximum band
ratios were calculated using the maximum value from
[rrs(443) / rrs(555), rrs(490) / rrs(555), rrs(510) /rrs(555)]
or [rrs(443) / rrs(560), rrs(490) / rrs(560),
rrs(510) / rrs(560)] if rrs(555) was not available. The
relationship between maximum band ratio and chlorophyll
is close to the NASA OC4 and OC4E v6 standard algorithm
(http://oceancolor.gsfc.nasa.gov/cms/atbd/chlor_a), equally
based on maximum band ratios, providing confidence in the
quality of the compiled data.
The inherent optical properties (aph, adg and bbp) are
available at 27 unique wavelengths between 405 and 683 nm.
There are a total of 1276, 1123 and 638 observations for
aph, adg and bbp, respectively. For aph the total num
ber of observations is distributed among NOMAD (1190),