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Full text: A compilation of global bio-optical in situ data for ocean-colour satellite applications

A. Valente et al.: A compilation of global bio-optical in situ data 
239 
www.earth-syst-sci-data.net/8/235/2016/ 
Earth Syst. Sei. Data, 8, 235-252, 2016 
ical Data Center ETOPOl; Amante and Eakins, 2009). For 
observations where the closest water depth was above sea 
level (e.g. data collected very near the coast), it was given 
the value of zero. 
Data processing thus included two major steps: prepro 
cessing and merging. The first step was related to each set 
of contributing datasets in particular and aimed to identify 
problems and convert the data of interest to a standard for 
mat. The second step dealt with the integration of all data 
into one unique hie and included the elimination of dupli 
cated data between the individual sets of data acquired. In 
the next subsections a brief overview of each original set of 
data is provided. 
2.2 Preprocessing of each set of data 
2.2.1 Marine Optical Buoy (MOBY) 
The Marine Optical Buoy (MOBY) is a fixed mooring sys 
tem operated by the National Oceanic and Atmospheric Ad 
ministration (NOAA) that provides a continuous time series 
of water-leaving radiance and surface irradiance in the visi 
ble region of the spectra from 1997 onwards. The site is lo 
cated a few kilometres west of the Hawaiian island of Lana’i 
where the water depth is about 1200 m. Since its deployment, 
MOBY measurements have been the primary basis for the 
on-orbit vicarious calibrations of the SeaWiFS and MODIS 
ocean-colour sensors. A full description of the MOBY sys 
tem and processing is provided in Clark et al. (2003). Data 
are freely available for scientific use at the MOBY Gold di 
rectory. The products of interest are the Scientific Time Se 
ries hies, which refer to MOBY data averaged over sensor- 
specific wavelengths and particular hours of the day (around 
20:00-23:00 UTC). For this work, the satellite band-average 
products for SeaWiFS, MODIS AQUA and MERIS were 
compiled from the January 2005 reprocessing for the early 
data and from the latest reprocessing for data after 2011. 
The “inband” average subproduct was used, and to main 
tain the highest quality, only data determined from the upper 
two arms (Fwl) and hagged “good” quality were acquired. 
Data from the MOBY203 deployment were discarded due 
to the absence of surface irradiance data. The compiled vari 
able was the remote-sensing rehectance, rrs, which was com 
puted from the original water-leaving radiance (Fw) and sur 
face irradiance (Es). The water-leaving radiances were cor 
rected for the bidirectional nature of the light held (Morel 
and Gentili, 1996; Morel et al., 2002) using the same look-up 
table and method as that used in the SeaWiFS Data Analy 
sis System (SeaDAS) processing code. As mentioned before, 
the MOBY data compiled in this work are sensor-specific. 
Therefore, attention is necessary to use the correct MOBY 
data when validating a particular sensor. The way MOBY 
data are stored in the final merged table is consistent with 
the original wavelengths; however, these wavelengths can 
differ from what is sometimes expected to be the central 
wavelength of a given band and sensor. Irrespective of the 
wavelength where MOBY data are stored in the final ta 
ble, for validation of bands 1-6 of SeaWiFS, MOBY data 
stored in the final merged table at 412, 443, 490, 510, 555 
and 670 nm, respectively, should be used. For validation of 
bands 1-6 of MODIS AQUA, MOBY data stored in the final 
merged table at 416, 442, 489, 530, 547 and 665 nm, respec 
tively, should be used. Finally, for validation of bands 1-7 
of MERIS, MOBY data stored in the final merged table at 
410.5, 440.4, 487.8, 507.7, 557.6, 617.5 and 662.4 nm, re 
spectively, are the appropriate data. 
2.2.2 BOUée pour I’acquiSition de Séries Optiques à 
Long termE (BOUSSOLE) 
The BOUée pour F acquisition de Séries Optiques à Fong 
termE (BOUSSOFE) project started in 2001 with the ob 
jective of establishing a time series of bio-optical properties 
in oceanic waters to support the calibration and validation 
of ocean-colour satellite sensors (Antoine et al., 2006). The 
project is composed of a monthly cruise program and a per 
manent optics mooring (Antoine et al., 2008). The mooring 
collects radiometry and inherent optical properties (IOPs) 
in continuous mode every 15 min at two depths (4 and 9 m 
nominally). The monthly cruises are devoted to the mooring 
servicing, to the collection of vertical profiles of radiome 
try and IOPs, and to water sampling at 11 depths from the 
surface down to 200 m, for subsequent analyses including 
phytoplankton pigments, particulate absorption, CDOM ab 
sorption and suspended particulate matter load. The BOUS 
SOFE mooring is in the western Mediterranean Sea at a wa 
ter depth of 2400 m. All pigment (2001-2012) and radio- 
metric (2003-2012) data were provided by the principal in 
vestigator. The compiled variables were rrs and chla_hplc. 
Observations of the diffuse attenuation coefficient (kd) were 
not included in the present compilation, as they were un 
der internal quality revision at the time of data acquisition. 
Remote-sensing reflectance was computed from the original 
“fully normalised” water-leaving radiance (nFw_ex), which 
is the “normalised” water-leaving radiance (nFw previously 
described), with a correction for the bidirectional nature of 
the light held (Morel and Gentili, 1996; Morel et al., 2002). 
The solar irradiance (Fo) was computed from two available 
variables in the original set of data - nFw and rrs - using the 
equation Fo = nFw/rrs. Only radiometric observations that 
meet the following criteria were used: (1) tilt of the buoy was 
less than 10°; (2) the buoy was not lowered by more than 
2 m as compared to its nominal water line (to ensure the Es 
reference sensor is above water and exempt from sea spray); 
and (3) the solar irradiance was within 10 % of its theoretical 
clear-sky value (determined from Gregg and Carder, 1990). 
The latter criterion was used to select clear skies only. An 
additional quality control was to remove observations that 
were 50 % higher or lower than the daily average. This re 
moved a small number of spikes in the time series. The final
	        
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